Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs9745060 | chr15:27029779 | G/T | 0.000141 | 213 | 10.83 | 19.83 | 15.1 | KM Plot |
KIRP | rs9745064 | chr15:27029794 | G/T | 0.000141 | 213 | 10.83 | 19.83 | 15.1 | KM Plot |
KIRP | rs9747334 | chr17:80840989 | C/T | 6.63E-5 | 202 | 14.85 | 17.2 | 13.17 | KM Plot |
KIRP | rs9747628 | chr17:80841013 | T/C | 7.17E-5 | 201 | 14.87 | 17.2 | 13.17 | KM Plot |
KIRP | rs9806591 | chr15:83334016 | A/G | 0.000659 | 214 | 15.88 | 20.53 | 8.73 | KM Plot |
KIRP | rs9812791 | chr3:49682311 | G/A | 0.000534 | 213 | 14.13 | 17 | 19.53 | KM Plot |
KIRP | rs9822268 | chr3:49719729 | G/A | 0.000534 | 214 | 14.53 | 16.93 | 19.53 | KM Plot |
KIRP | rs9823546 | chr3:49705512 | T/A | 0.000366 | 214 | 13.73 | 16.93 | 23.63 | KM Plot |
KIRP | rs9837341 | chr3:49664767 | A/G | 0.000625 | 213 | 13.73 | 16.93 | 25.33 | KM Plot |
KIRP | rs9852529 | chr3:49730625 | G/A | 0.000366 | 213 | 14.13 | 16.93 | 23.63 | KM Plot |
KIRP | rs9858213 | chr3:49731861 | G/T | 0.000366 | 213 | 14.13 | 16.93 | 23.63 | KM Plot |
KIRP | rs9869788 | chr3:143395333 | T/C | 0.000329 | 212 | 11.43 | 14.53 | 16.43 | KM Plot |
KIRP | rs9882740 | chr3:49702484 | T/C | 0.000366 | 214 | 13.73 | 16.93 | 23.63 | KM Plot |
KIRP | rs9899623 | chr17:46094038 | G/T | 2.63E-8 | 209 | 16.43 | 14.83 | 9 | KM Plot |
KIRP | rs9910259 | chr17:47204385 | A/G | 1.57E-5 | 203 | 4.82 | 16.78 | 16.47 | KM Plot |